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Nature Protocols

Publication date: 2021-07-01
Volume: 16 Pages: 3322 - 3347
Publisher: Nature Research

Author:

van Daal, Rik
Aydin, Cagatay ; Michon, Frederic ; Aarts, Arno ; Kraft, Michael ; Kloosterman, Fabian ; Haesler, Sebastian

Keywords:

Science & Technology, Life Sciences & Biomedicine, Biochemical Research Methods, Biochemistry & Molecular Biology, HIGH-DENSITY, Animals, Behavior, Animal, Electrodes, Implanted, Electrophysiology, Mice, Inbred C57BL, Neurons, Printing, Three-Dimensional, Rats, Long-Evans, Skull, Wakefulness, Mice, Rats, G096219N#54971234, 03 Chemical Sciences, 06 Biological Sciences, 11 Medical and Health Sciences, Bioinformatics

Abstract:

How dynamic activity in neural circuits gives rise to behaviour is a major area of interest in neuroscience. A key experimental approach for addressing this question involves measuring extracellular neuronal activity in awake, behaving animals. Recently developed Neuropixels probes have provided a step-change in recording neural activity in large tissue volumes with high spatiotemporal resolution. This protocol describes the chronic implantation of Neuropixels probes in mice and rats using compact and reusable 3D-printed fixtures. The fixtures facilitate stable chronic in-vivo recordings in freely behaving rats and mice. They consist of two parts: a covered main body and a skull connector. Single, dual, and movable probe fixture variants are available. After completing an experiment, probes are safely recovered for reimplantation by a dedicated retrieval mechanism. Fixture assembly and surgical implantation typically take 4-5 h, probe retrieval takes about half an hour, followed by a 12 h incubation in probe cleaning agent. The duration of data acquisition depends on the type of behavioral experiment. Since our protocol enables stable, chronic recordings over weeks, it enableslongitudinal large-scale single-unit data to be routinely obtained in a cost-efficient manner, which will facilitate many studies in systems neuroscience.