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Title: Functional proteome analysis of the banana plant (Musa spp.) using de novo sequence analysis of derivatized peptides
Authors: Samyn, Bart ×
Sergeant, Kjell
Carpentier, Sebastien
Debyser, Griet
Panis, Bart
Swennen, Rony
Van Beeumen, Jozef #
Issue Date: Jan-2007
Publisher: Amer chemical soc
Series Title: Journal of proteome research vol:6 issue:1 pages:70-80
Abstract: We report the use of chemical derivatization with MALDI-MS/MS analysis for de novo sequence analysis. Using three frequently used homology-based search algorithms, we were able to identify more than 40 proteins from banana, a nonmodel plant with unsequenced genome. Furthermore, this approach allowed the identification of different isoforms. We also observed that the identification score obtained varied according to the position of the peptide sequences in the query using the MS-Blast algorithm.
URI: 
ISSN: 1535-3893
Publication status: published
KU Leuven publication type: IT
Appears in Collections:Division of Crop Biotechnics
× corresponding author
# (joint) last author

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