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Title: SmashCommunity: a metagenomic annotation and analysis tool
Authors: Arumugam, Manimozhiyan ×
Harrington, Eoghan D
Foerstner, Konrad U
Raes, Jeroen
Bork, Peer #
Issue Date: Dec-2010
Publisher: Oxford University Press
Series Title: Bioinformatics vol:26 issue:23 pages:2977-2978
Article number: 10.1093/bioinformatics/btq536
Abstract: SmashCommunity is a stand-alone metagenomic annotation and analysis pipeline suitable for data from Sanger and 454 sequencing technologies. It supports state-of-the-art software for essential metagenomic tasks such as assembly and gene prediction. It provides tools to estimate the quantitative phylogenetic and functional compositions of metagenomes, to compare compositions of multiple metagenomes and to produce intuitive visual representations of such analyses.
URI: 
ISSN: 1367-4803
Publication status: published
KU Leuven publication type: IT
Appears in Collections:Non-KU Leuven Association publications
× corresponding author
# (joint) last author

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