Title: Pancreatic cancer circulating tumour cells express a cell motility gene signature that predicts survival after surgery
Authors: Sergeant, Gregory ×
van Eijsden, Rudy
Roskams, Tania
Van Duppen, Victor
Topal, Baki #
Issue Date: Nov-2012
Publisher: BioMed Central
Series Title: BMC Cancer vol:12 issue:1
Article number: 527
Abstract: ABSTRACT: BACKGROUND: Most cancer deaths are caused by metastases, resulting from circulating tumor cells (CTC) that detach from the primary cancer and survive in distant organs. The aim of the present study was to develop a CTC gene signature and to assess its prognostic relevance after surgery for pancreatic ductal adenocarcinoma (PDAC). METHODS: Negative depletion fluorescence activated cell sorting (FACS) was developed and validated with spiking experiments using cancer cell lines in whole human blood samples. This FACS-based method was used to enrich for CTC from the blood of 10 patients who undergoing surgery for PDAC. Total RNA was isolated from 4 subgroup samples, i.e. CTC, haematological cells (G), original tumour (T), and non-tumoural pancreatic control tissue (P). After RNA quality control, samples of 6 patients were eligible for further analysis. Whole genome microarray analysis was performed after double linear amplification of RNA. 'Ingenuity Pathway Analysis' software and AmiGO were used for functional data analyses. A CTC gene signature was developed and validated with the nCounter system on expression data of 78 primary PDAC using Cox regression analysis for disease-free (DFS) and overall survival (OS). RESULTS: Using stringent statistical analysis, we retained 8,152 genes to compare expression profiles of CTC vs. other subgroups, and found 1,059 genes to be differentially expressed. The pathway with the highest expression ratio in CTC was p38 mitogen-activated protein kinase (p38 MAPK) signaling, known to be involved in cancer cell migration. In the p38 MAPK pathway, TGF-beta1, cPLA2, and MAX were significantly upregulated. In addition, 9 other genes associated with both p38 MAPK signaling and cell motility were overexpressed in CTC. High co-expression of TGF-beta1 and our cell motility panel (>= 4 out of 9 genes for DFS and >= 4 out of 9 genes for OS) in primary PDAC was identified as an independent predictor of DFS (p=0.041, HR (95% CI) = 1.885 (1.025 -- 3.559)) and OS (p=0.047, HR (95% CI) = 1.366 (1.004 -- 1.861)). CONCLUSIONS: Pancreatic CTC isolated from blood samples using FACS-based negative depletion, express a cell motility gene signature. Expression of this newly defined cell motility gene signature in the primary tumour can predict survival of patients undergoing surgical resection for pancreatic cancer.Trial registration: Clinical NCT00495924.
ISSN: 1471-2407
Publication status: published
KU Leuven publication type: IT
Appears in Collections:Translational Cell & Tissue Research
Abdominal Surgical Oncology
Nucleomics Core
× corresponding author
# (joint) last author

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